ChangelogΒΆ

Name

PR

Developer

Date

Version

Add depmap ingestion script

39

Zethson

2024-08-21

✨Add chebi/chembl 2024-07-27

38

Zethson

2024-08-20

🍱 Bionty-assets instance is back

37

sunnyosun

2024-08-14

✨ Uniprot 2024-03

36

sunnyosun

2024-07-18

Add more version statistics

35

Zethson

2024-05-17

Add gene ensembl 111 and 112

33

Zethson

2024-05-16

Add ICD 10 XML -> CSV script

32

Zethson

2024-03-18

Add ICD 11 preparation script

31

Zethson

2024-01-24

🍱 Added Gene ensembl-110

30

sunnyosun

2023-07-31

🍱 Added uniprot 2023-03

29

sunnyosun

2023-07-18

✨ Curated clo from csv file

28

sunnyosun

2023-07-05

🍱 Consistently convert greek to latin letters in cell marker

27

sunnyosun

2023-06-22

🍱 Aggregated no meta names in cellmarker

26

sunnyosun

2023-06-17

🍱 Updated cellmarker curation

25

sunnyosun

2023-06-16

πŸ‘· Update CI

24

sunnyosun

2023-06-15

✨ Curated uniprot 2023-02

23

sunnyosun

2023-06-15

✨ Curated ensembl release-109 gene

22

sunnyosun

2023-06-14

⬆️ Upgrade to latest cookiecutter

21

falexwolf

2023-03-21

πŸ“ Added ensembl-mysql notebook to notes

20

sunnyosun

2022-11-14

πŸ› Fixed mouse gene table

19

sunnyosun

2022-10-26

🍱 Updated protein table

18

sunnyosun

2022-10-25

🍱 Updated cell marker table

17

sunnyosun

2022-10-25

🍱 Updated gene table with unique bionty ids

16

sunnyosun

2022-10-25

✨ Ingested ensembl species

15

sunnyosun

2022-10-24

♻️ Migrated bionty-assets.lndb to new ids, removed deprecated nbs

14

sunnyosun

2022-10-24

🎨 Added version and gene description to the gene tables

13

sunnyosun

2022-09-27

✨ Ingested ensembl genes, uniprot, cell maker using Lamindb

12

sunnyosun

2022-09-26

✨ Add ids to protein and cell_marker

11

sunnyosun

2022-09-26

✨ Added ids to the gene table

10

sunnyosun

2022-09-26

✨ Ingested human CellMarker

9

sunnyosun

2022-08-26

✨ New uniprot tables

8

sunnyosun

2022-08-26

🍱 Added the Gene Synonym column

7

sunnyosun

2022-08-17

🍱 Ingested ensembl ids table

6

sunnyosun

2022-08-17

🍱 Ingested mouse geneset from MGI

5

sunnyosun

2022-08-17

🍱 Migrated examples from bionty here

4

sunnyosun

2022-06-29

🍱 Added notebook for ingesting UniProt tables

3

sunnyosun

2022-06-29

πŸ“ Absorb hard-to-test code from bionty in notes here

2

falexwolf

2022-06-28

πŸ“ Ingest Mondo, Cell Ontology, and HGNC gene table

1

falexwolf

2022-06-28